Rust is increasingly being used for performant implementations of various algorithms, including those used in computational biology
Rust is increasingly being used for performant implementations of various algorithms, including those used in computational biology. Some examples include a minhash algorithm implemented by OneCodex and a pseudo-aligner by 10X Genomics.
I thought it would be useful to start compiling a collection of these rust implementations as they appear, and so I’ve started an awesome-rust-biology-algorithms list to track them.
For attribution, please cite this work as
Stewart (2018, Nov. 18). Andrew Stewart: Awesome Rust for Biology Algorithms. Retrieved from https://andrewcstewart.github.io/posts/2018-11-18-awesome-rust-for-biology-algorithms/
BibTeX citation
@misc{stewart2018awesome,
author = {Stewart, Andrew},
title = {Andrew Stewart: Awesome Rust for Biology Algorithms},
url = {https://andrewcstewart.github.io/posts/2018-11-18-awesome-rust-for-biology-algorithms/},
year = {2018}
}